[ Source: minimap2 ]
Package: python3-mappy (2.27+dfsg-1 and others)
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Python3 interface minimap2
Minimap2 is a versatile sequence alignment program that aligns DNA or mRNA sequences against a large reference database. Typical use cases include: (1) mapping PacBio or Oxford Nanopore genomic reads to the human genome; (2) finding overlaps between long reads with error rate up to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA or Direct RNA reads against a reference genome; (4) aligning Illumina single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full- genome alignment between two closely related species with divergence below ~15%.
This package contains the Python3 interface for using minimap2.
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Download python3-mappy
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 2.26+dfsg-1 | 210.2 kB | 956.0 kB | [list of files] |
| amd64 | 2.27+dfsg-1 | 175.9 kB | 671.0 kB | [list of files] |
| arm64 | 2.27+dfsg-1 | 167.3 kB | 695.0 kB | [list of files] |
| armel | 2.27+dfsg-1 | 188.7 kB | 777.0 kB | [list of files] |
| armhf | 2.27+dfsg-1 | 190.7 kB | 561.0 kB | [list of files] |
| hppa (unofficial port) | 2.27+dfsg-1 | 226.9 kB | 907.0 kB | [list of files] |
| i386 | 2.27+dfsg-1 | 225.1 kB | 985.0 kB | [list of files] |
| ia64 (unofficial port) | 2.24+dfsg-3+b1 | 256.8 kB | 1,500.0 kB | [list of files] |
| m68k (unofficial port) | 2.27+dfsg-1 | 187.0 kB | 799.0 kB | [list of files] |
| mips64el | 2.27+dfsg-1 | 195.8 kB | 977.0 kB | [list of files] |
| ppc64 (unofficial port) | 2.27+dfsg-1 | 215.4 kB | 1,079.0 kB | [list of files] |
| ppc64el | 2.27+dfsg-1 | 200.1 kB | 951.0 kB | [list of files] |
| riscv64 | 2.27+dfsg-1 | 222.9 kB | 679.0 kB | [list of files] |
| s390x | 2.27+dfsg-1 | 227.8 kB | 955.0 kB | [list of files] |
| sh4 (unofficial port) | 2.24+dfsg-3+b2 | 233.3 kB | 693.0 kB | [list of files] |
| sparc64 (unofficial port) | 2.27+dfsg-1 | 183.0 kB | 2,115.0 kB | [list of files] |
| x32 (unofficial port) | 2.24+dfsg-2+b1 | 143.0 kB | 341.0 kB | [list of files] |