Package: norsnet (1.0.17-4)

Links for norsnet

Debian Resources:

Download Source Package norsnet:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Christian Mertes (QA Page)
Laszlo Kajan (QA Page)
Andreas Tille (QA Page)

External Resources:

Homepage [www.rostlab.org]

Similar packages:

tool to identify unstructured loops in proteins

NORSnet can distinguish between very long contiguous segments with non-regular secondary structure (NORS regions) and well-folded proteins.

NORSnet was trained on predicted information rather than on experimental data. This allows NORSnet to reach into regions in sequence space that are not covered by specialized disorder predictors. One disadvantage of this approach is that it is not optimal for the identification of the "average" disordered region.

NORSnet takes the following input, further described on norsnet(1):

 * a protein sequence in a FASTA file
 * secondary structure and solvent accessibility prediction by prof(1)
 * an HSSP file
 * flexible/rigid residues prediction by profbval(1)

Other Packages Related to norsnet

depends

recommends

suggests

enhances

dep: profnet-norsnet

neural network architecture for norsnet

rec: blast2

transitional dummy package to ncbi-blast+-legacy
rec: librg-utils-perl

parsers and format conversion utilities used by (e.g.) profphd
rec: profbval

predictor of flexible/rigid protein residues from sequence
rec: profphd

secondary structure and solvent accessibility predictor

sug: pp-popularity-contest

PredictProtein popularity contest

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