[ Source: cufflinks ]
Package: cufflinks (2.2.1+dfsg.1-9) [non-free]
Links for cufflinks
Debian Resources:
Download Source Package cufflinks:
- [cufflinks_2.2.1+dfsg.1-9.dsc]
- [cufflinks_2.2.1+dfsg.1.orig.tar.gz]
- [cufflinks_2.2.1+dfsg.1-9.debian.tar.xz]
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Alexandre Mestiashvili (QA Page)
- Andreas Tille (QA Page)
- Charles Plessy (QA Page)
External Resources:
- Homepage [cufflinks.cbcb.umd.edu]
Similar packages:
Transcript assembly, differential expression and regulation for RNA-Seq
Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one.
This package provides the binary of cufflinks and associated tools, i.e. compress_gtf, cuffcompare, cuffdiff, cuffmerge, cuffnorm, cuffquant and gtf_to_sam.
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Download cufflinks
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| ppc64el | 1,557.6 kB | 13,796.0 kB | [list of files] |