Paketti: fastqtl (2.184+v7+dfsg-4 ja muut)

Links for fastqtl

Debian-palvelut:

Imuroi lähdekoodipaketti fastqtl:

Ylläpitäjät:

External Resources:

Kotisivu [fastqtl.sourceforge.net]

Samankaltaisia paketteja:

Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes

The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.

Tagit: Field: Biology, Bioinformatics, User Interface: interface::commandline, role::program, Purpose: Analysing

Muut pakettiin fastqtl liittyvät paketit

depends

recommends

suggests

enhances

dep: libblas3

Basic Linear Algebra Reference implementations, shared library

tai libblas.so.3

näennäispaketti, jonka toteuttaa libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libboost-iostreams1.83.0 (>= 1.83.0)

Boost.Iostreams -kirjasto
dep: libboost-program-options1.83.0 (>= 1.83.0)

program options library for C++
dep: libc6 (>= 2.38)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgcc-s1 (>= 3.0) [ei armel, armhf, riscv64]

GCC:n apukirjasto

dep: libgcc-s1 (>= 3.4) [riscv64]

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: libgsl28 (>= 2.8+dfsg)

GNU Scientific Library (GSL) -- library package
dep: libhts3t64 (>= 1.17)

C library for high-throughput sequencing data formats
dep: libstdc++6 (>= 14)

GNU standardi C++ -kirjasto, versio 3
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: r-mathlib (>= 4.4.1)

GNU R standalone mathematics library

rec: r-cran-argparser

GNU R command-line argument parser
rec: r-cran-qvalue

Paketti ei saatavilla
rec: r-cran-tools

Paketti ei saatavilla

sug: fastqtl-doc

QTL mapper in cis for molecular phenotypes - documentation

Imuroi fastqtl

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	2.184+v7+dfsg-4+b3	237.4 kt	790.0 kt	[tiedostoluettelo]
arm64	2.184+v7+dfsg-4+b3	202.7 kt	726.0 kt	[tiedostoluettelo]
armel	2.184+v7+dfsg-4+b3	187.2 kt	661.0 kt	[tiedostoluettelo]
armhf	2.184+v7+dfsg-4+b3	189.4 kt	497.0 kt	[tiedostoluettelo]
i386	2.184+v7+dfsg-4+b3	234.8 kt	769.0 kt	[tiedostoluettelo]
mips64el	2.184+v7+dfsg-4+b3	195.1 kt	821.0 kt	[tiedostoluettelo]
ppc64el	2.184+v7+dfsg-4+b3	243.8 kt	918.0 kt	[tiedostoluettelo]
riscv64	2.184+v7+dfsg-4+b3	208.9 kt	566.0 kt	[tiedostoluettelo]
s390x	2.184+v7+dfsg-4+b3	219.1 kt	758.0 kt	[tiedostoluettelo]