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Source Package: trinityrnaseq (2.6.6+dfsg-6)

Links for trinityrnaseq

Debian-palvelut:

Ylläpitäjät:

External Resources:

Kotisivu [trinityrnaseq.github.io]

Seuraavat binääripaketit on käännetty tästä lähdepaketista:

trinityrnaseq: RNA-Seq De novo Assembly
trinityrnaseq-examples: RNA-Seq De novo Assembly common example and testing files

Muut pakettiin trinityrnaseq liittyvät paketit

build-depends

build-depends-indep

adep: debhelper (>= 11~)

helper programs for debian/rules
adep: jellyfish (>= 2.1.4)

count k-mers in DNA sequences
adep: libjung-free-java

Java Universal Network/Graph Framework
adep: javahelper

Helper scripts for packaging Java programs
adep: libgetopt-java

GNU getopt - Java port
adep: default-jdk

Standard Java or Java compatible Development Kit
adep: parafly

parallel command processing using OpenMP
adep: libjs-jquery

JavaScript library for dynamic web applications
adep: jaligner

Smith-Waterman algorithm with Gotoh's improvement
adep: libhts-dev

development files for the HTSlib
adep: bowtie2

ultrafast memory-efficient short read aligner
adep: salmon

wicked-fast transcript quantification from RNA-seq data
adep: zlib1g-dev

compression library - development

Download trinityrnaseq

Tiedosto	Koko (kt)	MD5-tarkiste
trinityrnaseq_2.6.6+dfsg-6.dsc	2.2 kt	f5c516d28548277504ff47a2acba85b2
trinityrnaseq_2.6.6+dfsg.orig.tar.xz	227,682.9 kt	fcd4c7f246b355da4284d7104e74dd54
trinityrnaseq_2.6.6+dfsg-6.debian.tar.xz	24.1 kt	0261c2bd1492725907b2224ed8c866f7

Debian Package Source Repository (VCS: Git): https://salsa.debian.org/med-team/trinityrnaseq.git
Debian Package Source Repository (Browsable): https://salsa.debian.org/med-team/trinityrnaseq