Paketti: boxshade (3.3.1-14) [debports]

Links for boxshade

Debian-palvelut:

Vikailmoitukset

Imuroi lähdekoodipaketti :

Ei löytynyt

Ylläpitäjät:

External Resources:

Kotisivu [www.ch.embnet.org]

Samankaltaisia paketteja:

Pretty-printing of multiple sequence alignments

Boxshade is a program for creating good looking printouts from multiple-aligned protein or DNA sequences. The program does not perform the alignment by itself and requires as input a file that was created by a multiple alignment program or manually edited with respective tools.

Boxshade reads multiple-aligned sequences from either PILEUP-MSF, CLUSTAL-ALN, MALIGNED-data and ESEE-save files (limited to a maximum of 150 sequences with up to 10000 elements each). Various kinds of shading can be applied to identical/similar residues. Output is written to screen or to a file in the following formats: ANSI/VT100, PS/EPS, RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML

Muut pakettiin boxshade liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.7)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb

sug: kalign

Global and progressive multiple sequence alignment

tai clustalw

global multiple nucleotide or peptide sequence alignment

tai mafft

Multiple alignment program for amino acid or nucleotide sequences

tai hmmer

profile hidden Markov models for protein sequence analysis
sug: seaview

Multiplatform interface for sequence alignment and phylogeny
sug: texlive-latex-extra

TeX Live: LaTeX additional packages
sug: xfig

Facility for Interactive Generation of figures under X11

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