[ Source: bio-eagle ]
Paketti: bio-eagle (2.4.1-3 ja muut)
Links for bio-eagle
Debian-palvelut:
Imuroi lähdekoodipaketti bio-eagle:
Ylläpitäjät:
External Resources:
- Kotisivu [data.broadinstitute.org]
Samankaltaisia paketteja:
Haplotype phasing within a genotyped cohort or using a phased reference panel
Eagle estimates haplotype phase either within a genotyped cohort or using a phased reference panel. The basic idea of the Eagle1 algorithm is to harness identity-by-descent among distant relatives—which is pervasive at very large sample sizes but rare among smaller numbers of samples—to rapidly call phase using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a full probabilistic model similar to the diploid Li-Stephens model used by previous HMM-based methods.
Please note: The executable was renamed to bio-eagle because of a name clash. Please read more about this in /usr/share/doc/bio-eagle/README.Debian.
Muut pakettiin bio-eagle liittyvät paketit
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- dep: libboost-iostreams1.74.0 (>= 1.74.0)
- Boost.Iostreams -kirjasto
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- dep: libboost-program-options1.74.0 (>= 1.74.0)
- program options library for C++
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- dep: libc6 (>= 2.29)
- GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC:n apukirjasto
- dep: libgcc-s1 (>= 4.2) [i386]
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libopenblas0
- Optimized BLAS (linear algebra) library (meta)
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- dep: libstdc++6 (>= 5.2)
- GNU standardi C++ -kirjasto, versio 3
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- rec: med-config (>= 2.1)
- Debian Med general config package
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- sug: bio-eagle-examples
- Examples for bio-eagle
Imuroi bio-eagle
| Arkkitehtuuri | Versio | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|---|
| amd64 | 2.4.1-3+b1 | 218.8 kt | 619.0 kt | [tiedostoluettelo] |
| i386 | 2.4.1-3+b1 | 244.9 kt | 674.0 kt | [tiedostoluettelo] |