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[ Source: dialign-t  ]

Paketti: dialign-tx (1.0.2-13)

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Segment-based multiple sequence alignment

DIALIGN-TX is a command line tool to perform multiple alignment of protein or DNA sequences. It is a complete reimplementation of the segment-base approach including several new improvements and heuristics that significantly enhance the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T. For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that favours chains of low-scoring local alignments over isolated high-scoring fragments. For multiple alignment, DIALIGN-TX uses an improved greedy procedure that is less sensitive to spurious local sequence similarities.

Tagit: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::TODO, Supports Format: Plain Text, Works with: Need an extra tag

Muut pakettiin dialign-tx liittyvät paketit

  • depends
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  • suggests
  • enhances

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Arkkitehtuuri Paketin koko Koko asennettuna Tiedostot
amd64 80.2 kt204.0 kt [tiedostoluettelo]
arm64 84.5 kt188.0 kt [tiedostoluettelo]
armel 68.1 kt184.0 kt [tiedostoluettelo]
armhf 65.1 kt136.0 kt [tiedostoluettelo]
i386 76.9 kt204.0 kt [tiedostoluettelo]
mips64el 97.5 kt244.0 kt [tiedostoluettelo]
mipsel 89.0 kt211.0 kt [tiedostoluettelo]
ppc64el 95.4 kt277.0 kt [tiedostoluettelo]
s390x 72.4 kt200.0 kt [tiedostoluettelo]