[ Source: assemblytics ]
Paketti: assemblytics (1.0+ds-2)
Links for assemblytics
Debian-palvelut:
Imuroi lähdekoodipaketti assemblytics:
Ylläpitäjät:
External Resources:
- Kotisivu [assemblytics.com]
Samankaltaisia paketteja:
detect and analyze structural variants from a genome assembly
Assemblytics incorporates a unique anchor filtering approach to increase robustness to repetitive elements, and identifies six classes of variants based on their distinct alignment signatures. Assemblytics can be applied both to comparing aberrant genomes, such as human cancers, to a reference, or to identify differences between related species.
Muut pakettiin assemblytics liittyvät paketit
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- dep: perl
- Larry Wallin kieli tekstitiedostojen analysointia ja raportointia varten
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: r-base-core
- GNU R core of statistical computation and graphics system
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- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- dep: r-cran-plyr
- tools for splitting, applying and combining data
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- dep: r-cran-rcolorbrewer
- GNU R package providing suitable color palettes
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- rec: mummer
- Efficient sequence alignment of full genomes
Imuroi assemblytics
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| all | 18.5 kt | 88.0 kt | [tiedostoluettelo] |