[ Source: r-bioc-progeny ]
Paketti: r-bioc-progeny (1.20.0+ds-1)
Links for r-bioc-progeny
Debian-palvelut:
Imuroi lähdekoodipaketti r-bioc-progeny:
- [r-bioc-progeny_1.20.0+ds-1.dsc]
- [r-bioc-progeny_1.20.0+ds.orig.tar.xz]
- [r-bioc-progeny_1.20.0+ds-1.debian.tar.xz]
Ylläpitäjät:
External Resources:
- Kotisivu [bioconductor.org]
Samankaltaisia paketteja:
activity inference from gene expression
This package provides a function to infer pathway activity from gene expression using PROGENy. It contains the linear model which is described in the publication "Perturbation-response genes reveal signaling footprints in cancer gene expression".
Muut pakettiin r-bioc-progeny liittyvät paketit
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- dep: r-api-4.0
- näennäispaketti, jonka toteuttaa r-base-core
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- dep: r-api-bioc-3.16
- näennäispaketti, jonka toteuttaa r-bioc-biocgenerics
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- dep: r-base-core (>= 4.2.2.20221110-1)
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-biobase
- base functions for Bioconductor
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- dep: r-bioc-decoupler
- infer biological activities from omics data
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- dep: r-cran-dplyr
- GNU R grammar of data manipulation
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- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- dep: r-cran-ggrepel
- auto-position non-overlapping text labels in plots
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- dep: r-cran-gridextra
- GNU R package with extensions for the grid package
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- dep: r-cran-reshape2
- Flexibly reshape data: a reboot of the reshape package
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- dep: r-cran-tidyr
- GNU R package to easily tidy data
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- rec: r-cran-testthat (>= 2.1.0)
- GNU R testsuite
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- sug: r-bioc-biocfilecache
- GNU R management of files across sessions
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- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
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- sug: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
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- sug: r-bioc-deseq2
- R package for RNA-Seq Differential Expression Analysis
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- sug: r-bioc-singlecellexperiment
- S4 Classes for Single Cell Data
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- sug: r-cran-broom
- convert statistical analysis objects into tidy data frames with GNU R
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-pheatmap
- GNU R package to create pretty heatmaps
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- sug: r-cran-readr
- GNU R package to read rectangular text data
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- sug: r-cran-readxl
- GNU R package to read Excel files
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- sug: r-cran-seurat
- Tools for Single Cell Genomics
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- sug: r-cran-tibble
- GNU R Simple Data Frames
Imuroi r-bioc-progeny
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| all | 8,690.4 kt | 8,788.0 kt | [tiedostoluettelo] |