Paketti: r-bioc-hdf5array (1.26.0-1)

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HDF5 backend for DelayedArray objects

Implements the HDF5Array and TENxMatrix classes, 2 convenient and memory-efficient array-like containers for on-disk representation of HDF5 datasets. HDF5Array is for datasets that use the conventional (i.e. dense) HDF5 representation. TENxMatrix is for datasets that use the HDF5-based sparse matrix representation from 10x Genomics (e.g. the 1.3 Million Brain Cell Dataset). Both containers being DelayedArray extensions, they support all operations supported by DelayedArray objects. These operations can be either delayed or block-processed.

Muut pakettiin r-bioc-hdf5array liittyvät paketit

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dep: libc6 (>= 2.4)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libhdf5-103-1

HDF5 C runtime files - serial version
dep: libhdf5-hl-100

HDF5 High Level runtime files - serial version
dep: r-api-4.0

näennäispaketti, jonka toteuttaa r-base-core
dep: r-api-bioc-3.16

näennäispaketti, jonka toteuttaa r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-1)

GNU R core of statistical computation and graphics system
dep: r-bioc-biocgenerics (>= 0.31.5)

generic functions for Bioconductor
dep: r-bioc-delayedarray (>= 0.15.16)

BioConductor delayed operations on array-like objects
dep: r-bioc-iranges

GNU R low-level containers for storing sets of integer ranges
dep: r-bioc-rhdf5 (>= 2.31.6)

BioConductor HDF5 interface to R
dep: r-bioc-rhdf5filters

GNU R HDF5 compression filters
dep: r-bioc-rhdf5lib

GNU R hdf5 library
dep: r-bioc-s4vectors (>= 0.27.13)

BioConductor S4 implementation of vectors and lists
dep: r-cran-matrix

GNU R package of classes for dense and sparse matrices

sug: r-bioc-biocparallel

BioConductor facilities for parallel evaluation
sug: r-bioc-experimenthub

BioConductor client to access ExperimentHub resources
sug: r-bioc-genomicfeatures

GNU R tools for making and manipulating transcript centric annotations
sug: r-bioc-genomicranges

BioConductor representation and manipulation of genomic intervals
sug: r-bioc-singlecellexperiment

S4 Classes for Single Cell Data
sug: r-bioc-summarizedexperiment (>= 1.15.1)

BioConductor assay container
sug: r-cran-runit

GNU R package providing unit testing framework

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