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/usr/lib/R/site-library/qtl/BUGS.txt
/usr/lib/R/site-library/qtl/CITATION
/usr/lib/R/site-library/qtl/DESCRIPTION
/usr/lib/R/site-library/qtl/INDEX
/usr/lib/R/site-library/qtl/INSTALL_ME.txt
/usr/lib/R/site-library/qtl/MQM-TODO.txt
/usr/lib/R/site-library/qtl/Meta/Rd.rds
/usr/lib/R/site-library/qtl/Meta/data.rds
/usr/lib/R/site-library/qtl/Meta/features.rds
/usr/lib/R/site-library/qtl/Meta/hsearch.rds
/usr/lib/R/site-library/qtl/Meta/links.rds
/usr/lib/R/site-library/qtl/Meta/nsInfo.rds
/usr/lib/R/site-library/qtl/Meta/package.rds
/usr/lib/R/site-library/qtl/Meta/vignette.rds
/usr/lib/R/site-library/qtl/NAMESPACE
/usr/lib/R/site-library/qtl/NEWS.md
/usr/lib/R/site-library/qtl/R/qtl
/usr/lib/R/site-library/qtl/R/qtl.rdb
/usr/lib/R/site-library/qtl/R/qtl.rdx
/usr/lib/R/site-library/qtl/contrib/bin/CMakeLists.txt
/usr/lib/R/site-library/qtl/contrib/bin/FindRLibs.cmake
/usr/lib/R/site-library/qtl/contrib/bin/README
/usr/lib/R/site-library/qtl/contrib/bin/mqmdebugout.cpp
/usr/lib/R/site-library/qtl/contrib/bin/mqmmain.cpp
/usr/lib/R/site-library/qtl/contrib/bin/regressiontests.bat
/usr/lib/R/site-library/qtl/contrib/bin/rtest/regression/mqm_listeria1.rtest
/usr/lib/R/site-library/qtl/contrib/bin/rtest/regression/scanone_mr.rtest
/usr/lib/R/site-library/qtl/contrib/bin/rtest/test_augmentation.R
/usr/lib/R/site-library/qtl/contrib/bin/rtest/test_mqm_hyper_prob.R
/usr/lib/R/site-library/qtl/contrib/bin/rtest/test_mqm_listeria1.R
/usr/lib/R/site-library/qtl/contrib/bin/rtest/test_scanone_mr.R
/usr/lib/R/site-library/qtl/contrib/bin/scripts/cleanup.sh
/usr/lib/R/site-library/qtl/contrib/bin/scripts/create-diff.sh
/usr/lib/R/site-library/qtl/contrib/bin/scripts/profiler.sh
/usr/lib/R/site-library/qtl/contrib/bin/scripts/r.sh
/usr/lib/R/site-library/qtl/contrib/bin/scripts/regression_tests.sh
/usr/lib/R/site-library/qtl/contrib/bin/scripts/regression_tests_windows.bat
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/usr/lib/R/site-library/qtl/contrib/bin/test/chridhyper.txt
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/usr/lib/R/site-library/qtl/contrib/bin/test/filledgenohyper.txt
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/usr/lib/R/site-library/qtl/contrib/bin/test/genohyper.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/markerpos.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/markerposhyper.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/pheno.dat
/usr/lib/R/site-library/qtl/contrib/bin/test/phenohyper.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/debugout_dnorm.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/debugout_pbeta.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t11out-test0.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t11out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t12out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t13out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t21out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t22out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t23out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t24out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t25out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t31out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t32out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t33out.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/regression/t34out.txt
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/usr/lib/R/site-library/qtl/contrib/bin/test/settingshyper.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/genotypes1.txt
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/usr/lib/R/site-library/qtl/contrib/bin/test/std/genotypes2m.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/genotypes3.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/genotypes3m.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/markers1.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/markers2.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/markers3.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/phenotypes1.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/phenotypes2.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/phenotypes3.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/settings1.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/settings2.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/std/settings3.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/t11/cofactors.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/t12/cofactors.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/t22/cofactors.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/t23/cofactors.txt
/usr/lib/R/site-library/qtl/contrib/bin/test/t33/cofactors.txt
/usr/lib/R/site-library/qtl/contrib/bin/wincompile.bat
/usr/lib/R/site-library/qtl/contrib/biolib/CMakeLists.txt
/usr/lib/R/site-library/qtl/contrib/biolib/README
/usr/lib/R/site-library/qtl/contrib/scripts/check_rqtl.sh
/usr/lib/R/site-library/qtl/contrib/scripts/cleanup.sh
/usr/lib/R/site-library/qtl/contrib/scripts/install_rqtl.sh
/usr/lib/R/site-library/qtl/contrib/scripts/repl_inputs.rb
/usr/lib/R/site-library/qtl/contrib/scripts/run_all_tests.sh
/usr/lib/R/site-library/qtl/contrib/scripts/update_header.rb
/usr/lib/R/site-library/qtl/data/badorder.RData
/usr/lib/R/site-library/qtl/data/bristle3.RData
/usr/lib/R/site-library/qtl/data/bristleX.RData
/usr/lib/R/site-library/qtl/data/fake.4way.RData
/usr/lib/R/site-library/qtl/data/fake.bc.RData
/usr/lib/R/site-library/qtl/data/fake.f2.RData
/usr/lib/R/site-library/qtl/data/hyper.RData
/usr/lib/R/site-library/qtl/data/listeria.RData
/usr/lib/R/site-library/qtl/data/locations.RData
/usr/lib/R/site-library/qtl/data/map10.RData
/usr/lib/R/site-library/qtl/data/mapthis.RData
/usr/lib/R/site-library/qtl/data/multitrait.RData
/usr/lib/R/site-library/qtl/doc/Sources/MQM/MQM-tour.R
/usr/lib/R/site-library/qtl/doc/Sources/MQM/MQM-tour.Rnw
/usr/lib/R/site-library/qtl/doc/Sources/MQM/MQM-tour.tex
/usr/lib/R/site-library/qtl/doc/Sources/MQM/SweaveIt.R
/usr/lib/R/site-library/qtl/doc/Sources/MQM/SweaveIt.Rout
/usr/lib/R/site-library/qtl/doc/Sources/MQM/mqm/advantages_Rd.txt
/usr/lib/R/site-library/qtl/doc/Sources/MQM/mqm/advantages_latex.txt
/usr/lib/R/site-library/qtl/doc/Sources/MQM/mqm/description.txt
/usr/lib/R/site-library/qtl/doc/Sources/MQM/mqm/limitations.txt
/usr/lib/R/site-library/qtl/doc/Sources/MQM/mqm/parallelisation_references.txt
/usr/lib/R/site-library/qtl/doc/Sources/MQM/mqm/significance_references.txt
/usr/lib/R/site-library/qtl/doc/Sources/MQM/mqm/standard_example.txt
/usr/lib/R/site-library/qtl/doc/Sources/MQM/mqm/standard_references.txt
/usr/lib/R/site-library/qtl/doc/Sources/MQM/mqm/standard_seealso.txt
/usr/lib/R/site-library/qtl/doc/Sources/MQM/sweaveit.bat
/usr/lib/R/site-library/qtl/doc/Sources/MQM/sweaveit.sh
/usr/lib/R/site-library/qtl/doc/Sources/geneticmaps.Rnw
/usr/lib/R/site-library/qtl/doc/Sources/new_multiqtl.Rnw
/usr/lib/R/site-library/qtl/doc/Sources/new_summary_scanone.Rnw
/usr/lib/R/site-library/qtl/doc/Sources/new_summary_scantwo.Rnw
/usr/lib/R/site-library/qtl/doc/Sources/rqtltour.tex
/usr/lib/R/site-library/qtl/doc/Sources/rqtltour2.tex
/usr/lib/R/site-library/qtl/doc/bcsft.R
/usr/lib/R/site-library/qtl/doc/bcsft.Rnw
/usr/lib/R/site-library/qtl/doc/bcsft.pdf
/usr/lib/R/site-library/qtl/doc/geneticmaps.R
/usr/lib/R/site-library/qtl/doc/geneticmaps.pdf
/usr/lib/R/site-library/qtl/doc/index.html
/usr/lib/R/site-library/qtl/doc/new_multiqtl.R
/usr/lib/R/site-library/qtl/doc/new_multiqtl.pdf
/usr/lib/R/site-library/qtl/doc/new_summary_scanone.R
/usr/lib/R/site-library/qtl/doc/new_summary_scanone.pdf
/usr/lib/R/site-library/qtl/doc/new_summary_scantwo.R
/usr/lib/R/site-library/qtl/doc/new_summary_scantwo.pdf
/usr/lib/R/site-library/qtl/doc/rqtltour.R
/usr/lib/R/site-library/qtl/doc/rqtltour.pdf
/usr/lib/R/site-library/qtl/doc/rqtltour2.R
/usr/lib/R/site-library/qtl/doc/rqtltour2.pdf
/usr/lib/R/site-library/qtl/help/AnIndex
/usr/lib/R/site-library/qtl/help/aliases.rds
/usr/lib/R/site-library/qtl/help/paths.rds
/usr/lib/R/site-library/qtl/help/qtl.rdb
/usr/lib/R/site-library/qtl/help/qtl.rdx
/usr/lib/R/site-library/qtl/html/00Index.html
/usr/lib/R/site-library/qtl/html/R.css
/usr/lib/R/site-library/qtl/libs/qtl.so
/usr/lib/R/site-library/qtl/sampledata/README.txt
/usr/lib/R/site-library/qtl/sampledata/gen.txt
/usr/lib/R/site-library/qtl/sampledata/listeria.csv
/usr/lib/R/site-library/qtl/sampledata/listeria.qtx
/usr/lib/R/site-library/qtl/sampledata/listeria_gen.csv
/usr/lib/R/site-library/qtl/sampledata/listeria_gen_rot.csv
/usr/lib/R/site-library/qtl/sampledata/listeria_map.txt
/usr/lib/R/site-library/qtl/sampledata/listeria_maps.txt
/usr/lib/R/site-library/qtl/sampledata/listeria_phe.csv
/usr/lib/R/site-library/qtl/sampledata/listeria_phe_rot.csv
/usr/lib/R/site-library/qtl/sampledata/listeria_qc_cro.txt
/usr/lib/R/site-library/qtl/sampledata/listeria_qc_map.txt
/usr/lib/R/site-library/qtl/sampledata/listeria_raw.txt
/usr/lib/R/site-library/qtl/sampledata/listeria_rot.csv
/usr/lib/R/site-library/qtl/sampledata/map.txt
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/usr/share/doc/r-cran-qtl/README.test
/usr/share/doc/r-cran-qtl/changelog.Debian.gz
/usr/share/doc/r-cran-qtl/copyright
/usr/share/doc/r-cran-qtl/examples
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/usr/share/doc/r-cran-qtl/tests/gen.txt.gz
/usr/share/doc/r-cran-qtl/tests/listeria.csv.gz
/usr/share/doc/r-cran-qtl/tests/listeria.map
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/usr/share/doc/r-cran-qtl/tests/listeria2.csv.gz
/usr/share/doc/r-cran-qtl/tests/listeria2.map
/usr/share/doc/r-cran-qtl/tests/map.txt
/usr/share/doc/r-cran-qtl/tests/phe.txt
/usr/share/doc/r-cran-qtl/tests/test_io.R
/usr/share/doc/r-cran-qtl/tests/test_io.Rout.save
/usr/share/doc/r-cran-qtl/tests/test_mapqtl_io.R
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/usr/share/doc/r-cran-qtl/tests/test_qtl.R
/usr/share/doc/r-cran-qtl/tests/test_scanonevar.R
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/usr/share/doc/r-cran-qtl/tests/test_tidyIO.R
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/usr/share/doc/r-cran-qtl/tests/testaugmentation.R
/usr/share/doc/r-cran-qtl/tests/testthat.R
/usr/share/doc/r-cran-qtl/tests/testthat/test-fliporder.R
/usr/share/doc/r-cran-qtl/tests/testthat/test-scantwoperm.R
/usr/share/doc/r-cran-qtl/tests/testthat/test-stepwiseqtl.R