Paketti: r-bioc-edger (3.40.2+dfsg-1)

Links for r-bioc-edger

Debian-palvelut:

Imuroi lähdekoodipaketti r-bioc-edger:

Ylläpitäjät:

External Resources:

Kotisivu [bioconductor.org]

Samankaltaisia paketteja:

Empirical analysis of digital gene expression data in R

Bioconductor package for differential expression analysis of whole transcriptome sequencing (RNA-seq) and digital gene expression profiles with biological replication. It uses empirical Bayes estimation and exact tests based on the negative binomial distribution. It is also useful for differential signal analysis with other types of genome-scale count data.

Tagit: Field: Biology, Bioinformatics, Implemented in: implemented-in::r, interface::commandline, Role: Program

Muut pakettiin r-bioc-edger liittyvät paketit

depends

recommends

suggests

enhances

dep: libblas3

Basic Linear Algebra Reference implementations, shared library

tai libblas.so.3

näennäispaketti, jonka toteuttaa libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libc6 (>= 2.29)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgcc-s1 (>= 3.5)

GCC:n apukirjasto
dep: liblapack3

Library of linear algebra routines 3 - shared version

tai liblapack.so.3

näennäispaketti, jonka toteuttaa libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libstdc++6 (>= 5.2)

GNU standardi C++ -kirjasto, versio 3
dep: r-api-4.0

näennäispaketti, jonka toteuttaa r-base-core
dep: r-api-bioc-3.16

näennäispaketti, jonka toteuttaa r-bioc-biocgenerics
dep: r-base-core (>= 4.2.2.20221110-2)

GNU R core of statistical computation and graphics system
dep: r-bioc-limma (>= 3.41.5)

linear models for microarray data
dep: r-cran-locfit

GNU R local regression, likelihood and density estimation
dep: r-cran-rcpp

GNU R package for Seamless R and C++ Integration

sug: r-bioc-annotationdbi

GNU R Annotation Database Interface for BioConductor
sug: r-bioc-biobase

base functions for Bioconductor
sug: r-bioc-org.hs.eg.db

genome-wide annotation for Human
sug: r-bioc-rhdf5

BioConductor HDF5 interface to R
sug: r-bioc-summarizedexperiment

BioConductor assay container
sug: r-cran-jsonlite

Robust, High Performance JSON Parser and Generator for R
sug: r-cran-readr

GNU R package to read rectangular text data
sug: r-cran-statmod

GNU R package providing algorithms and functions for statistical modeling

Imuroi r-bioc-edger

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