[ Source: python-pyfaidx ]
Paketti: python3-pyfaidx (0.7.1-2)
Links for python3-pyfaidx
Debian-palvelut:
Imuroi lähdekoodipaketti python-pyfaidx:
- [python-pyfaidx_0.7.1-2.dsc]
- [python-pyfaidx_0.7.1.orig.tar.gz]
- [python-pyfaidx_0.7.1-2.debian.tar.xz]
Ylläpitäjät:
- Debian Med Packaging Team (Laadunvalvontasivu, Mail Archive)
- Andreas Tille (Laadunvalvontasivu)
- Étienne Mollier (Laadunvalvontasivu)
External Resources:
- Kotisivu [github.com]
Samankaltaisia paketteja:
efficient random access to fasta subsequences for Python 3
Samtools provides a function "faidx" (FAsta InDeX), which creates a small flat index file ".fai" allowing for fast random access to any subsequence in the indexed FASTA file, while loading a minimal amount of the file in to memory. This Python module implements pure Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index. The pyfaidx module is API compatible with the pygr seqdb module. A command-line script "faidx" is installed alongside the pyfaidx module, and facilitates complex manipulation of FASTA files without any programming knowledge.
This package provides the Python 3 modules to access fasta files.
Muut pakettiin python3-pyfaidx liittyvät paketit
|
|
|
|
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-pkg-resources
- Package Discovery and Resource Access using pkg_resources
-
- dep: python3-six
- Python 2 and 3 compatibility library
-
- rec: python3-biopython
- Python3 library for bioinformatics
Imuroi python3-pyfaidx
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| all | 27.4 kt | 121.0 kt | [tiedostoluettelo] |