all options
bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Source: dextractor  ]

Package: dextractor (1.0-6 and others)

Links for dextractor

Screenshot

Debian Resources:

Download Source Package dextractor:

Maintainers:

External Resources:

Similar packages:

(d)extractor and compression command library

Dextractor commands allow one to pull exactly and only the information needed for assembly and reconstruction from the source HDF5 files produced by the PacBio RS II sequencer, or from the source BAM files produced by the PacBio Sequel sequencer.

For each of the three extracted file types -- fasta, quiva, and arrow -- the library contains commands to compress the given file type, and to decompress it, which is a reversible process delivering the original uncompressed file. The compressed .fasta files, with the extension .dexta, consume 1/4 byte per base. The compressed .quiva files, with the extension .dexqv, consume 1.5 bytes per base on average, and the compressed .arrow files, with the extension .dexar, consume 1/4 byte per base

For more information, please view the available documentation at https://github.com/thegenemyers/DEXTRACTOR

Other Packages Related to dextractor

  • depends
  • recommends
  • suggests
  • enhances

Download dextractor

Download for all available architectures
Architecture Version Package Size Installed Size Files
armel 1.0-6+b1 43.3 kB277.0 kB [list of files]