Package: snpomatic (1.0-7)

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fast, stringent short-read mapping software

High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments.

SNP-o-matic is a fast, stringent short-read mapping software. It supports a multitude of output types and formats, for uses in filtering reads, alignments, sequence-based genotyping calls, assisted reassembly of contigs etc.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with::biological-sequence

Other Packages Related to snpomatic

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dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
dep: libgcc-s1 (>= 3.0) [not armel, armhf]

GCC support library

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3

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Architecture	Package Size	Installed Size	Files
amd64	83.6 kB	208.0 kB	[list of files]
arm64	71.6 kB	216.0 kB	[list of files]
armel	66.4 kB	167.0 kB	[list of files]
armhf	67.5 kB	127.0 kB	[list of files]
i386	85.9 kB	211.0 kB	[list of files]
mips64el	74.8 kB	222.0 kB	[list of files]
ppc64el	82.2 kB	216.0 kB	[list of files]
s390x	79.3 kB	204.0 kB	[list of files]