Package: unikmer (0.19.1-1 and others)
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- Homepage [github.com]
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Toolkit for nucleic acid k-mer analysis
unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.
K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.
TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.
Other Packages Related to unikmer
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
Download unikmer
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
amd64 | 0.19.1-1+b6 | 2,556.5 kB | 8,125.0 kB | [list of files] |
arm64 | 0.19.1-1+b6 | 2,193.8 kB | 7,741.0 kB | [list of files] |
armel | 0.19.1-1+b6 | 2,194.4 kB | 7,727.0 kB | [list of files] |
armhf | 0.19.1-1+b6 | 2,185.4 kB | 7,695.0 kB | [list of files] |
i386 | 0.19.1-1+b6 | 2,373.0 kB | 7,760.0 kB | [list of files] |
mips64el | 0.19.1-1+b6 | 1,983.0 kB | 8,912.0 kB | [list of files] |
ppc64el | 0.19.1-1+b6 | 2,181.8 kB | 7,932.0 kB | [list of files] |
riscv64 | 0.19.1-1+b4 | 2,226.1 kB | 7,829.0 kB | [list of files] |
s390x | 0.19.1-1+b6 | 2,329.0 kB | 8,581.0 kB | [list of files] |