Package: libseqlib2 (1.2.0+dfsg-11 and others)
Links for libseqlib2
Debian Resources:
Download Source Package libseqlib:
- [libseqlib_1.2.0+dfsg-11.dsc]
- [libseqlib_1.2.0+dfsg.orig.tar.xz]
- [libseqlib_1.2.0+dfsg-11.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
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Download libseqlib2
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| amd64 | 1.2.0+dfsg-11+b1 | 167.7 kB | 569.0 kB | [list of files] |
| arm64 | 1.2.0+dfsg-11+b1 | 140.9 kB | 468.0 kB | [list of files] |
| armel | 1.2.0+dfsg-11+b1 | 132.9 kB | 431.0 kB | [list of files] |
| armhf | 1.2.0+dfsg-11+b1 | 135.8 kB | 335.0 kB | [list of files] |
| i386 | 1.2.0+dfsg-11+b1 | 174.9 kB | 511.0 kB | [list of files] |
| mips64el | 1.2.0+dfsg-11+b1 | 140.6 kB | 558.0 kB | [list of files] |
| ppc64el | 1.2.0+dfsg-11+b1 | 165.1 kB | 597.0 kB | [list of files] |
| s390x | 1.2.0+dfsg-11+b1 | 154.8 kB | 512.0 kB | [list of files] |