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Source Package: beast-mcmc (1.10.4+dfsg-2)

Links for beast-mcmc

The following binary packages are built from this source package:

beast-mcmc: Bayesian MCMC phylogenetic inference
beast-mcmc-examples: Bayesian MCMC phylogenetic inference - example data
libnucleotidelikelihoodcore0: implementation of LikelihoodCore for nucleotides used by beast-mcmc

adep: debhelper (>= 11~)

helper programs for debian/rules
adep: javahelper

Helper scripts for packaging Java programs
adep: ant

Java based build tool like make
adep: ant-optional

Java based build tool like make - optional libraries
adep: default-jdk

Standard Java or Java compatible Development Kit
adep: libjebl2-java

Java Evolutionary Biology Library
adep: libjam-java (>= 0.1.20140824)

Java applications look and behave like native applications
adep: figtree

graphical phylogenetic tree viewer
adep: liboptions-java

command line option parsing library for Java
adep: libhmsbeagle-java (>= 3.1.2~)

High-performance lib for Bayesian and Maximum Likelihood phylogenetics (java)
adep: libcolt-free-java

scalable scientific and technical computing in Java
adep: libmpj-java

Java library for parallel applications for multicore processors and clusters
adep: r-cran-rjava

GNU R low-level interface to Java
adep: libcommons-math-java

Java lightweight mathematics and statistics components
adep: libjdom1-java

lightweight and fast library using XML
adep: junit4

JUnit regression test framework for Java
adep: libmtj-java

Java library for developing numerical applications
adep: libitext1-java

Java Library to generate PDF on the Fly
adep: libejml-java (>= 0.38)

Efficient Java Matrix Library
adep: libjlapack-java

LAPACK numerical subroutines translated from their Fortran 77 source

Debian Package Source Repository (VCS: Git): https://salsa.debian.org/med-team/beast-mcmc.git
Debian Package Source Repository (Browsable): https://salsa.debian.org/med-team/beast-mcmc