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[ Source: r-bioc-hilbertvis  ]

Package: r-bioc-hilbertvis (1.60.0-1 and others)

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GNU R package to visualise long vector data

This tool allows one to display very long data vectors in a space-efficient manner, by organising it along a 2D Hilbert curve. The user can then visually judge the large scale structure and distribution of features simultaenously with the rough shape and intensity of individual features.

In bioinformatics, a typical use case is ChIP-Chip and ChIP-Seq, or basically all the kinds of genomic data, that are conventionally displayed as quantitative track ("wiggle data") in genome browsers such as those provided by Ensembl or UCSC.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::r, role::program, Purpose: Analysing

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Download r-bioc-hilbertvis

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 1.60.0-1 866.0 kB1,562.0 kB [list of files]
amd64 1.60.0-1 866.0 kB1,511.0 kB [list of files]
arm64 1.60.0-1 866.0 kB1,562.0 kB [list of files]
armel 1.60.0-1 867.5 kB1,510.0 kB [list of files]
armhf 1.60.0-1 866.1 kB1,506.0 kB [list of files]
hppa (unofficial port) 1.60.0-1 868.3 kB1,510.0 kB [list of files]
i386 1.60.0-1 866.7 kB1,510.0 kB [list of files]
ia64 (unofficial port) 1.60.0-1 866.8 kB1,510.0 kB [list of files]
m68k (unofficial port) 1.60.0-1 865.9 kB1,506.0 kB [list of files]
mips64el 1.60.0-1 866.1 kB1,563.0 kB [list of files]
ppc64 (unofficial port) 1.60.0-1 866.3 kB1,562.0 kB [list of files]
ppc64el 1.60.0-1 866.3 kB1,562.0 kB [list of files]
riscv64 1.60.0-1+b1 866.1 kB1,507.0 kB [list of files]
s390x 1.60.0-1 865.9 kB1,506.0 kB [list of files]
sh4 (unofficial port) 1.60.0-1 867.5 kB1,562.0 kB [list of files]
sparc64 (unofficial port) 1.60.0-1 865.8 kB2,523.0 kB [list of files]
x32 (unofficial port) 1.60.0-1 865.7 kB1,510.0 kB [list of files]