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[ Source: poa  ]

Package: poa (2.0+20060928-8)

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Partial Order Alignment for multiple sequence alignment

POA is Partial Order Alignment, a fast program for multiple sequence alignment (MSA) in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment. Partial order alignment is an approach to MSA, which can be combined with existing methods such as progressive alignment. POA optimally aligns a pair of MSAs and which therefore can be applied directly to progressive alignment methods such as CLUSTAL. For large alignments, Progressive POA is 10-30 times faster than CLUSTALW.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, works-with-format::plaintext, Works with: Need an extra tag

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 52.0 kB140.0 kB [list of files]
arm64 49.0 kB131.0 kB [list of files]
armel 49.6 kB135.0 kB [list of files]
armhf 47.8 kB111.0 kB [list of files]
i386 52.6 kB147.0 kB [list of files]
mips64el 49.9 kB156.0 kB [list of files]
mipsel 49.1 kB143.0 kB [list of files]
ppc64el 56.1 kB184.0 kB [list of files]
s390x 49.6 kB139.0 kB [list of files]