Package: libvcflib1 (1.0.2+dfsg-2)

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C++ library for parsing and manipulating VCF files

The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.

vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:

 * an API for parsing and operating on records of genomic variation as it can
   be described by the VCF format,
 * and a collection of command-line utilities for executing complex
   manipulations on VCF files.

Tags: Role: Shared Library

Other Packages Related to libvcflib1

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dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
dep: libdisorder0 (>= 0.0.2)

library for entropy measurement of byte streams
dep: libfastahack0 (>= 0.0+git20160702.bbc645f+dfsg-5~)

library for indexing and sequence extraction from FASTA files (lib)
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

determine similar regions between two strings or genomic sequences (lib)
dep: libstdc++6 (>= 9)

GNU Standard C++ Library v3
dep: libtabixpp0 (>= 1.0.0)

C++ wrapper to tabix indexer

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