[ Source: allelecount ]
Package: allelecount (4.2.1-1)
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Download Source Package allelecount:
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- Homepage [github.com]
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NGS copy number algorithms
Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings).
The alleleCount package primarily exists to prevent code duplication between some other projects, specifically AscatNGS and Battenberg.
Other Packages Related to allelecount
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- dep: libc6 (>= 2.17) [arm64, ppc64el]
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.7) [not arm64, ppc64el]
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
Download allelecount
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 27.9 kB | 90.0 kB | [list of files] |
| arm64 | 27.1 kB | 86.0 kB | [list of files] |
| armel | 27.5 kB | 85.0 kB | [list of files] |
| armhf | 26.7 kB | 77.0 kB | [list of files] |
| i386 | 28.5 kB | 89.0 kB | [list of files] |
| mips64el | 26.7 kB | 92.0 kB | [list of files] |
| mipsel | 26.6 kB | 87.0 kB | [list of files] |
| ppc64el | 29.6 kB | 118.0 kB | [list of files] |
| s390x | 27.0 kB | 90.0 kB | [list of files] |