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[ Source: daligner  ]

Package: daligner (1.0+git20221215.bd26967-1)

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local alignment discovery between long nucleotide sequencing reads

These tools permit one to find all significant local alignments between reads encoded in a Dazzler database. The assumption is that the reads are from a Pacific Biosciences RS II long read sequencer. That is, the reads are long and noisy, up to 15% on average.

Tags: Implemented in: C, User Interface: Command Line, Role: Program

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Architecture Package Size Installed Size Files
amd64 228.0 kB1,541.0 kB [list of files]
arm64 198.4 kB1,863.0 kB [list of files]
armel 188.8 kB1,435.0 kB [list of files]
armhf 190.1 kB1,059.0 kB [list of files]
i386 220.7 kB1,675.0 kB [list of files]
mips64el 186.8 kB1,972.0 kB [list of files]
mipsel 199.5 kB2,031.0 kB [list of files]
ppc64el 222.1 kB2,057.0 kB [list of files]
s390x 204.7 kB1,535.0 kB [list of files]