Alle Optionen
bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Quellcode: lighter  ]

Paket: lighter (1.1.2-7)

Links für lighter

Screenshot

Debian-Ressourcen:

Quellcode-Paket lighter herunterladen:

Betreuer:

Externe Ressourcen:

Ähnliche Pakete:

fast and memory-efficient sequencing error corrector

Lighter is a fast, memory-efficient tool for correcting sequencing errors. Lighter avoids counting k-mers. Instead, it uses a pair of Bloom filters, one holding a sample of the input k-mers and the other holding k-mers likely to be correct. As long as the sampling fraction is adjusted in inverse proportion to the depth of sequencing, Bloom filter size can be held constant while maintaining near-constant accuracy. Lighter is parallelized, uses no secondary storage, and is both faster and more memory-efficient than competing approaches while achieving comparable accuracy.

Andere Pakete mit Bezug zu lighter

  • hängt ab von
  • empfiehlt
  • schlägt vor
  • erweitert

lighter herunterladen

Download für alle verfügbaren Architekturen
Architektur Paketgröße Größe (installiert) Dateien
i386 51,1 kB135,0 kB [Liste der Dateien]