Paket: norsnet (1.0.17-4)

Links für norsnet

Debian-Ressourcen:

Quellcode-Paket norsnet herunterladen:

Betreuer:

Debian Med Packaging Team (QS-Seite, E-Mail-Archiv)
Christian Mertes (QS-Seite)
Laszlo Kajan (QS-Seite)
Andreas Tille (QS-Seite)

Externe Ressourcen:

Homepage [www.rostlab.org]

tool to identify unstructured loops in proteins

NORSnet can distinguish between very long contiguous segments with non-regular secondary structure (NORS regions) and well-folded proteins.

NORSnet was trained on predicted information rather than on experimental data. This allows NORSnet to reach into regions in sequence space that are not covered by specialized disorder predictors. One disadvantage of this approach is that it is not optimal for the identification of the "average" disordered region.

NORSnet takes the following input, further described on norsnet(1):

 * a protein sequence in a FASTA file
 * secondary structure and solvent accessibility prediction by prof(1)
 * an HSSP file
 * flexible/rigid residues prediction by profbval(1)

Andere Pakete mit Bezug zu norsnet

hängt ab von

empfiehlt

schlägt vor

erweitert

dep: profnet-norsnet

neural network architecture for norsnet

rec: blast2

transitional dummy package to ncbi-blast+-legacy
rec: librg-utils-perl

Parser und Programme für Formatkonvertierungen, verwendet von (z.B.) profphd
rec: profbval

predictor of flexible/rigid protein residues from sequence
rec: profphd

secondary structure and solvent accessibility predictor

sug: pp-popularity-contest

PredictProtein popularity contest

norsnet herunterladen

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