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[ Quellcode: python-pyfaidx ]
Paket: python-pyfaidx (0.5.5.2-1)
Links für python-pyfaidx
Debian-Ressourcen:
Quellcode-Paket python-pyfaidx herunterladen:
- [python-pyfaidx_0.5.5.2-1.dsc]
- [python-pyfaidx_0.5.5.2.orig.tar.gz]
- [python-pyfaidx_0.5.5.2-1.debian.tar.xz]
Betreuer:
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
efficient random access to fasta subsequences for Python
Samtools provides a function "faidx" (FAsta InDeX), which creates a small flat index file ".fai" allowing for fast random access to any subsequence in the indexed FASTA file, while loading a minimal amount of the file in to memory. This Python module implements pure Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index. The pyfaidx module is API compatible with the pygr seqdb module. A command-line script "faidx" is installed alongside the pyfaidx module, and facilitates complex manipulation of FASTA files without any programming knowledge.
This package provides the Python 2 modules to access fasta files.
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python-pyfaidx herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 23,3 kB | 112,0 kB | [Liste der Dateien] |