[ Quellcode: bio-eagle ]
Paket: bio-eagle (2.4.1-3 und andere)
Links für bio-eagle
Debian-Ressourcen:
Quellcode-Paket bio-eagle herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [data.broadinstitute.org]
Ähnliche Pakete:
Haplotype phasing within a genotyped cohort or using a phased reference panel
Eagle estimates haplotype phase either within a genotyped cohort or using a phased reference panel. The basic idea of the Eagle1 algorithm is to harness identity-by-descent among distant relatives—which is pervasive at very large sample sizes but rare among smaller numbers of samples—to rapidly call phase using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a full probabilistic model similar to the diploid Li-Stephens model used by previous HMM-based methods.
Please note: The executable was renamed to bio-eagle because of a name clash. Please read more about this in /usr/share/doc/bio-eagle/README.Debian.
Andere Pakete mit Bezug zu bio-eagle
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- dep: libboost-iostreams1.74.0 (>= 1.74.0)
- Boost.Iostreams-Bibliothek
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- dep: libboost-program-options1.74.0 (>= 1.74.0)
- C++-Bibliothek für Programmoptionen
-
- dep: libc6 (>= 2.29)
- GNU-C-Bibliothek: Laufzeitbibliotheken
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC Support-Bibliothek
-
- dep: libgomp1 (>= 6)
- Unterstützungsbibliothek für GCC OpenMP (GOMP)
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- dep: libhts3 (>= 1.10)
- C-Bibliothek für Hochdurchsatz-Sequenzierungsdatenformate
-
- dep: libopenblas0
- Optimized BLAS (linear algebra) library (meta)
-
- dep: libstdc++6 (>= 5.2)
- GNU-Implementierung der Standard-C++-Bibliothek (Version 3)
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- rec: med-config (>= 2.1)
- Debian Med - allgemeines Konfigurationspaket
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- sug: bio-eagle-examples
- Examples for bio-eagle
bio-eagle herunterladen
| Architektur | Version | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|---|
| amd64 | 2.4.1-3+b1 | 218,8 kB | 619,0 kB | [Liste der Dateien] |