[ Source: canu ]
Package: canu (2.0+dfsg-1)
Links for canu
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Download Source Package canu:
Maintainer:
External Resources:
- Homepage [canu.readthedocs.org]
Similar packages:
Enkel molekyle sekvenssamler for genomer
Canu er en forgrening af Celera Assembler, designet for høj-støj enkel molekyle sekvensopbygning (såsom PacBio RS II eller Oxford Nanopore MinION).
Canu er en hierarkisk samlelinje, som kører i fire trin:
* Detekter overlap i sekvenser med høj støj med MHAP * Opret korrigeret sekvenskonsensus * Trim rettede sekvenser * Saml trimmede rettede sekvenser
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- dep: gnuplot
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- dep: libc6 (>= 2.29)
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also a virtual package provided by libc6-udeb
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- dep: libfilesys-df-perl
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- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [i386, mipsel]
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- dep: libgomp1 (>= 6)
- GCC OpenMP-understøttelsesbibliotek (GOMP)
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- dep: libstdc++6 (>= 5.2)
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- dep: mhap (>= 2.1.3)
- Lokalitetsfølsom hashing for at registrere long-read-overlap
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- dep: perl
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- sug: nanopolish
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- sug: pbgenomicconsensus
- Package not available
Download canu
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 1,226.6 kB | 9,210.0 kB | [list of files] |
| arm64 | 1,100.2 kB | 8,667.0 kB | [list of files] |
| armel | 1,075.7 kB | 8,521.0 kB | [list of files] |
| armhf | 1,101.1 kB | 6,673.0 kB | [list of files] |
| i386 | 1,352.2 kB | 10,418.0 kB | [list of files] |
| mips64el | 1,342.8 kB | 12,314.0 kB | [list of files] |
| mipsel | 1,386.0 kB | 11,249.0 kB | [list of files] |
| ppc64el | 1,218.4 kB | 12,366.0 kB | [list of files] |
| s390x | 1,072.7 kB | 9,029.0 kB | [list of files] |