[ Source: scoary ]
Package: scoary (1.6.16-2)
Links for scoary
Debian Resources:
Download Source Package scoary:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
pangenome-wide association studies
Scoary is designed to take the gene_presence_absence.csv file from Roary as well as a traits file created by the user and calculate the associations between all genes in the accessory genome and the traits. It reports a list of genes sorted by strength of association per trait.
Other Packages Related to scoary
|
|
|
|
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (>= 3.2)
-
- dep: python3-pkg-resources
- Package Discovery and Resource Access using pkg_resources
-
- dep: python3-scipy (>= 0.16)
- scientific tools for Python 3
-
- sug: roary
- high speed stand alone pan genome pipeline
Download scoary
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 228.8 kB | 2,686.0 kB | [list of files] |