Package: plink2 (2.00~a3-210203+dfsg-1 and others)

Links for plink2

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Download Source Package plink2:

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External Resources:

Homepage [www.cog-genomics.org]

Similar packages:

whole-genome association analysis toolset

plink expects as input the data from SNP (single nucleotide polymorphism) chips of many individuals and their phenotypical description of a disease. It finds associations of single or pairs of DNA variations with a phenotype and can retrieve SNP annotation from an online source.

SNPs can evaluated individually or as pairs for their association with the disease phenotypes. The joint investigation of copy number variations is supported. A variety of statistical tests have been implemented.

plink2 is a comprehensive update of plink and plink1.9 with new algorithms and new methods, faster and less memory consumer than the first plink.

Other Packages Related to plink2

depends

recommends

suggests

enhances

dep: libblas3

Basic Linear Algebra Reference implementations, shared library

or libblas.so.3

virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
dep: libdeflate0 (>= 1.0)

fast, whole-buffer DEFLATE-based compression and decompression
dep: liblapack3

Library of linear algebra routines 3 - shared version

or liblapack.so.3

virtual package provided by libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
dep: libzstd1 (>= 1.4.0)

fast lossless compression algorithm
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

Download plink2

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
ppc64el	2.00~a3-210203+dfsg-1+b1	960.9 kB	2,831.0 kB	[list of files]