[ Source: spoa ]
Package: spoa (4.0.7+ds-1 and others)
Links for spoa
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Download Source Package spoa:
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External Resources:
- Homepage [github.com]
Similar packages:
SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).
Other Packages Related to spoa
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- dep: libc6 (>= 2.4)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libspoa7.0.0 (>= 4.0.7+ds)
- SIMD partial order alignment library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download spoa
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| i386 | 4.0.7+ds-1+b1 | 37.8 kB | 78.0 kB | [list of files] |